Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EXZ48_14760 | Not Available | Positive | 3124993 - 3126186 | 40510.3 |
| group ii intron reverse transcriptase/maturase | EXZ48_14770 | Not Available | Positive | 3126861 - 3128375 | 58624.1 |
| sgnh/gdsl hydrolase family protein | EXZ48_14775 | Not Available | Positive | 3128558 - 3129730 | 41654.3 |
| histidine phosphatase family protein | EXZ48_14780 | Not Available | Negative | 3129787 - 3130392 | 22174.3 |
| abc transporter atp-binding protein | EXZ48_14785 | Not Available | Negative | 3130389 - 3131489 | 38956.4 |
| iron abc transporter permease | EXZ48_14790 | Not Available | Negative | 3131486 - 3133231 | 61738.5 |
| extracellular solute-binding protein | EXZ48_14795 | Not Available | Negative | 3133283 - 3134404 | 40376.3 |
| murr/rpir family transcriptional regulator | EXZ48_14800 | Not Available | Negative | 3134429 - 3135265 | 30483.9 |
| nad(p)/fad-dependent oxidoreductase | EXZ48_14805 | Not Available | Negative | 3135484 - 3136767 | 45908.3 |
| fructose bisphosphate aldolase | EXZ48_14810 | Not Available | Negative | 3136882 - 3137778 | 32173.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
