Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_14505 | Not Available | Positive | 3063380 - 3063568 | 7081.96 |
| abc transporter atp-binding protein | EXZ48_14510 | Not Available | Positive | 3063573 - 3064670 | 40197.6 |
| abc transporter atp-binding protein | EXZ48_14515 | Not Available | Positive | 3064663 - 3065658 | 36238.0 |
| dak2 domain-containing protein | EXZ48_14520 | Not Available | Positive | 3065673 - 3067292 | 54940.3 |
| efflux rnd transporter permease subunit | EXZ48_14525 | Not Available | Negative | 3067393 - 3070581 | 113889.0 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_14530 | Not Available | Negative | 3070909 - 3072099 | 41668.9 |
| alpha/beta hydrolase | EXZ48_14535 | Not Available | Negative | 3072158 - 3072955 | 27863.1 |
| lysr family transcriptional regulator | EXZ48_14540 | Not Available | Positive | 3073098 - 3074012 | 33326.3 |
| hypothetical protein | EXZ48_14545 | Not Available | Positive | 3074144 - 3074569 | 15104.0 |
| nitronate monooxygenase | EXZ48_14550 | Not Available | Positive | 3074632 - 3075708 | 37247.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
