Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing protein | EXZ48_14455 | Not Available | Positive | 3049287 - 3049901 | 22584.3 |
| nitrate transporter | EXZ48_14460 | Not Available | Positive | 3049898 - 3051109 | 42885.6 |
| nark/nasa family nitrate transporter | EXZ48_14465 | Not Available | Positive | 3051525 - 3052751 | 43359.1 |
| nad(p)/fad-dependent oxidoreductase | EXZ48_14470 | Not Available | Positive | 3052761 - 3055211 | 88569.1 |
| nitrite reductase small subunit nird | EXZ48_14475 | Not Available | Positive | 3055223 - 3055552 | 11738.3 |
| nitrate reductase | EXZ48_14480 | Not Available | Positive | 3055728 - 3058379 | 94234.4 |
| laci family dna-binding transcriptional regulator | EXZ48_14485 | Not Available | Negative | 3058496 - 3059542 | 38236.0 |
| extracellular solute-binding protein | EXZ48_14490 | Not Available | Positive | 3059839 - 3061173 | 49290.8 |
| sugar abc transporter permease | EXZ48_14495 | Not Available | Positive | 3061498 - 3062445 | 35595.2 |
| carbohydrate abc transporter permease | EXZ48_14500 | Not Available | Positive | 3062442 - 3063383 | 34327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
