Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion transporter | EXZ48_14295 | Not Available | Positive | 3018361 - 3019164 | 29930.9 |
| hypothetical protein | EXZ48_14300 | Not Available | Positive | 3019293 - 3019520 | 8241.28 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EXZ48_14305 | Not Available | Positive | 3019748 - 3020953 | 42184.3 |
| class ii glutamine amidotransferase | EXZ48_14310 | Not Available | Negative | 3020946 - 3021767 | 29970.6 |
| pirin family protein | EXZ48_14315 | Not Available | Positive | 3022044 - 3022955 | 33257.7 |
| gfa family protein | EXZ48_14320 | Not Available | Positive | 3023011 - 3023415 | 14705.3 |
| arac family transcriptional regulator | EXZ48_14325 | Not Available | Positive | 3023419 - 3024213 | 28439.9 |
| lyse family translocator | EXZ48_14330 | Not Available | Positive | 3024299 - 3024916 | 21481.1 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EXZ48_14335 | Not Available | Negative | 3024943 - 3025746 | 26960.6 |
| peptide chain release factor 3 | EXZ48_14340 | Not Available | Negative | 3026020 - 3027600 | 58605.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
