Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | EXZ48_14245 | Not Available | Negative | 3004940 - 3005875 | 32604.4 |
| transcriptional regulator gcva | EXZ48_14250 | Not Available | Positive | 3006012 - 3006908 | 32742.5 |
| gnat family n-acetyltransferase | EXZ48_14255 | Not Available | Negative | 3006920 - 3007417 | 18686.4 |
| chromosomal replication initiator protein dnaa | EXZ48_14260 | Not Available | Negative | 3007494 - 3008945 | 53859.9 |
| 30s ribosomal protein s20 | EXZ48_14265 | Not Available | Negative | 3009922 - 3010188 | 9408.43 |
| enoyl-coa hydratase | EXZ48_14270 | Not Available | Negative | 3010379 - 3011152 | 27264.4 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EXZ48_14275 | Not Available | Negative | 3011169 - 3012050 | 32370.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | EXZ48_14280 | Not Available | Positive | 3012234 - 3013010 | 28538.0 |
| 2-polyprenylphenol 6-hydroxylase | EXZ48_14285 | Not Available | Positive | 3013048 - 3014622 | 58105.0 |
| udp-n-acetylglucosamine-peptide n-acetylglucosaminyltransferase | EXZ48_14290 | Not Available | Positive | 3014701 - 3018318 | 130463.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
