Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EXZ48_14145 | Not Available | Negative | 2987389 - 2989683 | 81412.9 |
| signal peptidase ii | EXZ48_14150 | Not Available | Negative | 2989740 - 2990231 | 18600.3 |
| rna methyltransferase | EXZ48_14155 | Not Available | Negative | 2990228 - 2991082 | 30824.5 |
| class i sam-dependent rrna methyltransferase | EXZ48_14160 | Not Available | Negative | 2991079 - 2992005 | 34445.3 |
| carbon monoxide dehydrogenase | EXZ48_14165 | Not Available | Positive | 2992281 - 2992730 | 15358.3 |
| lapa family protein | EXZ48_14170 | Not Available | Negative | 2992743 - 2993087 | 12575.7 |
| integration host factor subunit beta | EXZ48_14175 | Not Available | Negative | 2993132 - 2993431 | 11132.1 |
| signal peptide peptidase sppa | EXZ48_14180 | Not Available | Negative | 2993459 - 2994409 | 34888.1 |
| lps export abc transporter periplasmic protein lptc | EXZ48_14185 | Not Available | Positive | 2994622 - 2995290 | 23835.9 |
| hypothetical protein | EXZ48_14190 | Not Available | Positive | 2995298 - 2995861 | 19675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
