Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EXZ48_14095 | Not Available | Negative | 2972904 - 2973551 | 21639.9 |
| nifu family protein | EXZ48_14100 | Not Available | Negative | 2973582 - 2974151 | 20396.3 |
| universal stress protein | EXZ48_14105 | Not Available | Negative | 2974251 - 2974742 | 17553.9 |
| tryptophan--trna ligase | EXZ48_14110 | Not Available | Negative | 2974779 - 2975846 | 38964.9 |
| duf882 domain-containing protein | EXZ48_14115 | Not Available | Positive | 2976124 - 2976597 | 17104.1 |
| murein biosynthesis integral membrane protein murj | EXZ48_14120 | Not Available | Negative | 2976603 - 2978195 | 57194.5 |
| [protein-pii] uridylyltransferase | EXZ48_14125 | Not Available | Negative | 2978192 - 2981086 | 108354.0 |
| dna mismatch repair protein muts | EXZ48_14130 | Not Available | Negative | 2981131 - 2983785 | 95467.7 |
| nadp-dependent malic enzyme | EXZ48_14135 | Not Available | Positive | 2983984 - 2986269 | 82608.2 |
| gnat family n-acetyltransferase | EXZ48_14140 | Not Available | Negative | 2986404 - 2987282 | 32163.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
