Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | EXZ48_13995 | Not Available | Negative | 2953648 - 2954592 | 32993.2 |
| peptide deformylase | EXZ48_14000 | Not Available | Negative | 2954683 - 2955207 | 19377.8 |
| dna recombination protein rmuc | EXZ48_14005 | Not Available | Positive | 2955332 - 2956525 | 43749.7 |
| ribokinase | EXZ48_14010 | Not Available | Positive | 2956570 - 2957469 | 30506.6 |
| methyl-accepting chemotaxis protein | EXZ48_14015 | Not Available | Positive | 2957749 - 2960082 | 82196.8 |
| hypothetical protein | EXZ48_14020 | Not Available | Negative | 2960142 - 2960501 | 13409.4 |
| nucleoside hydrolase | EXZ48_14025 | Not Available | Negative | 2960501 - 2961442 | 33850.1 |
| hsp20 family protein | EXZ48_14030 | Not Available | Positive | 2961629 - 2962060 | 16032.2 |
| duf1150 family protein | EXZ48_14035 | Not Available | Positive | 2962193 - 2962450 | 9204.92 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EXZ48_14040 | Not Available | Negative | 2962469 - 2963170 | 26617.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
