Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | EXZ48_13945 | Not Available | Positive | 2944848 - 2945735 | 31096.1 |
| dmt family transporter | EXZ48_13950 | Not Available | Negative | 2945754 - 2946671 | 32565.0 |
| pyrimidine 5'-nucleotidase | EXZ48_13955 | Not Available | Positive | 2946773 - 2947468 | 26153.2 |
| hypothetical protein | EXZ48_13960 | Not Available | Positive | 2947602 - 2948570 | 35090.2 |
| log family protein | EXZ48_13965 | Not Available | Negative | 2948684 - 2949577 | 33048.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EXZ48_13970 | Not Available | Positive | 2949765 - 2950622 | 30438.5 |
| duf805 domain-containing protein | EXZ48_13975 | Not Available | Positive | 2950626 - 2951012 | 14357.9 |
| succinyl-diaminopimelate desuccinylase | EXZ48_13980 | Not Available | Positive | 2951103 - 2952296 | 42502.7 |
| hypothetical protein | EXZ48_13985 | Not Available | Positive | 2952283 - 2952879 | 21481.1 |
| trna pseudouridine(38-40) synthase trua | EXZ48_13990 | Not Available | Negative | 2952905 - 2953648 | 27538.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
