Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | EXZ48_13895 | Not Available | Negative | 2934312 - 2935784 | 53410.9 |
| methyl-accepting chemotaxis protein | EXZ48_13900 | Not Available | Negative | 2935994 - 2938000 | 71286.1 |
| 50s ribosomal protein l34 | EXZ48_13905 | Not Available | Positive | 2938423 - 2938560 | 5211.55 |
| ribonuclease p protein component | EXZ48_13910 | Not Available | Positive | 2938594 - 2938986 | 14894.2 |
| membrane protein insertase yidc | EXZ48_13915 | Not Available | Positive | 2938983 - 2940779 | 67144.0 |
| dmt family transporter | EXZ48_13920 | Not Available | Positive | 2941002 - 2941913 | 31464.3 |
| yiha family ribosome biogenesis gtp-binding protein | EXZ48_13925 | Not Available | Positive | 2941966 - 2942619 | 23890.7 |
| fasciclin domain-containing protein | EXZ48_13930 | Not Available | Negative | 2942701 - 2943258 | 19003.0 |
| anti-sigma factor | EXZ48_13935 | Not Available | Negative | 2943447 - 2944181 | 25885.8 |
| sigma-70 family rna polymerase sigma factor | EXZ48_13940 | Not Available | Negative | 2944178 - 2944717 | 20488.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
