Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | EXZ48_13785 | Not Available | Negative | 2912589 - 2913779 | 42726.1 |
| long-chain-fatty-acid--coa ligase | EXZ48_13790 | Not Available | Positive | 2914081 - 2915781 | 61395.0 |
| glucose-6-phosphate isomerase | EXZ48_13795 | Not Available | Positive | 2915896 - 2917521 | 58450.0 |
| glycosyltransferase family 1 protein | EXZ48_13800 | Not Available | Negative | 2917518 - 2918603 | 39767.0 |
| carbohydrate kinase | EXZ48_13805 | Not Available | Negative | 2918644 - 2919573 | 32782.4 |
| orotate phosphoribosyltransferase | EXZ48_13810 | Not Available | Negative | 2919637 - 2920335 | 25235.7 |
| doxx family protein | EXZ48_13815 | Not Available | Negative | 2920483 - 2920926 | 15096.8 |
| hypothetical protein | EXZ48_13820 | Not Available | Positive | 2921120 - 2921308 | 6930.41 |
| crp/fnr family transcriptional regulator | EXZ48_13825 | Not Available | Positive | 2921444 - 2922148 | 25812.1 |
| adenylate/guanylate cyclase domain-containing protein | EXZ48_13830 | Not Available | Positive | 2922169 - 2924013 | 64808.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
