Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | EXZ48_13635 | Not Available | Negative | 2879842 - 2880588 | 25952.7 |
| Trna-gly | Not Available | Not Available | Positive | 2880939 - 2881012 | Not Available |
| hypothetical protein | EXZ48_13645 | Not Available | Positive | 2881113 - 2882660 | 55979.1 |
| laci family dna-binding transcriptional regulator | EXZ48_13650 | Not Available | Negative | 2882657 - 2883688 | 37811.3 |
| glycoside hydrolase family 37 | EXZ48_13655 | Not Available | Negative | 2883703 - 2885403 | 62026.8 |
| carbohydrate abc transporter permease | EXZ48_13660 | Not Available | Negative | 2885406 - 2886218 | 30891.4 |
| sugar abc transporter permease | EXZ48_13665 | Not Available | Negative | 2886211 - 2887155 | 35284.7 |
| sugar abc transporter substrate-binding protein | EXZ48_13670 | Not Available | Negative | 2887246 - 2888478 | 45086.3 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_13675 | Not Available | Negative | 2888500 - 2889642 | 41401.4 |
| 2'-deoxycytidine 5'-triphosphate deaminase | EXZ48_13680 | Not Available | Negative | 2889829 - 2890938 | 40023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
