Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EXZ48_13585 | Not Available | Negative | 2867503 - 2867949 | 16606.1 |
| histidine kinase | EXZ48_13590 | Not Available | Negative | 2867946 - 2869442 | 54484.5 |
| dmt family transporter | EXZ48_13595 | Not Available | Negative | 2869559 - 2870440 | 32038.2 |
| dmt family transporter | EXZ48_13600 | Not Available | Positive | 2870628 - 2871533 | 32315.5 |
| helix-turn-helix transcriptional regulator | EXZ48_13605 | Not Available | Positive | 2871628 - 2872290 | 24014.3 |
| transporter substrate-binding domain-containing protein | EXZ48_13610 | Not Available | Negative | 2872297 - 2873178 | 31936.0 |
| glycosyltransferase | EXZ48_13615 | Not Available | Positive | 2873235 - 2875169 | 71891.6 |
| beta-galactosidase | EXZ48_13620 | Not Available | Negative | 2875333 - 2877297 | 73397.6 |
| sdr family oxidoreductase | EXZ48_13625 | Not Available | Negative | 2877458 - 2878135 | 23244.7 |
| amino acid abc transporter permease | EXZ48_13630 | Not Available | Negative | 2878116 - 2879771 | 58725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
