Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | EXZ48_13535 | Not Available | Negative | 2854487 - 2858428 | 141293.0 |
| acyl-coa dehydrogenase | EXZ48_13540 | Not Available | Positive | 2858918 - 2860714 | 64881.1 |
| acetyl-coa c-acetyltransferase | EXZ48_13545 | Not Available | Positive | 2860781 - 2861989 | 42465.0 |
| fad-dependent oxidoreductase | EXZ48_13550 | Not Available | Positive | 2862181 - 2864388 | 79077.9 |
| cold-shock protein | EXZ48_13555 | Not Available | Positive | 2864728 - 2864937 | 7463.68 |
| cold-shock protein | EXZ48_13560 | Not Available | Positive | 2865052 - 2865339 | 10265.0 |
| 30s ribosomal protein s21 | EXZ48_13565 | Not Available | Positive | 2865487 - 2865726 | 9381.75 |
| hypothetical protein | EXZ48_13570 | Not Available | Positive | 2865807 - 2866031 | 8173.82 |
| hypothetical protein | EXZ48_13575 | Not Available | Positive | 2866189 - 2866371 | 6729.3 |
| response regulator | EXZ48_13580 | Not Available | Negative | 2866447 - 2867502 | 37575.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
