Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cap domain-containing protein | EXZ48_13485 | Not Available | Negative | 2845226 - 2845714 | 16922.2 |
| hypothetical protein | EXZ48_13490 | Not Available | Negative | 2845717 - 2845983 | 9802.45 |
| methyltransferase domain-containing protein | EXZ48_13495 | Not Available | Positive | 2846128 - 2847069 | 33647.0 |
| yitt family protein | EXZ48_13500 | Not Available | Positive | 2847135 - 2847770 | 22697.3 |
| ligase-associated dna damage response dexh box helicase | EXZ48_13505 | Not Available | Positive | 2847826 - 2850351 | 92723.2 |
| ligase-associated dna damage response endonuclease pdem | EXZ48_13510 | Not Available | Positive | 2850382 - 2851107 | 26322.1 |
| transcriptional regulator | EXZ48_13515 | Not Available | Positive | 2851228 - 2851734 | 18845.9 |
| universal stress protein | EXZ48_13520 | Not Available | Positive | 2851812 - 2852252 | 15381.7 |
| tigr02186 family protein | EXZ48_13525 | Not Available | Negative | 2852256 - 2853050 | 28852.0 |
| sulfite exporter taue/safe family protein | EXZ48_13530 | Not Available | Negative | 2853047 - 2853973 | 32697.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
