Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_13385 | Not Available | Negative | 2825356 - 2825616 | 9214.83 |
| hypothetical protein | EXZ48_13390 | Not Available | Negative | 2825672 - 2825926 | 8718.95 |
| amidohydrolase | EXZ48_13395 | Not Available | Negative | 2826560 - 2827729 | 42434.8 |
| abc transporter permease subunit | EXZ48_13400 | Not Available | Negative | 2827731 - 2828549 | 30454.1 |
| abc transporter permease | EXZ48_13405 | Not Available | Negative | 2828549 - 2829277 | 25364.7 |
| transporter substrate-binding domain-containing protein | EXZ48_13410 | Not Available | Negative | 2829340 - 2830122 | 27693.0 |
| atp-binding cassette domain-containing protein | EXZ48_13415 | Not Available | Negative | 2830151 - 2830924 | 28264.5 |
| amidinotransferase | EXZ48_13420 | Not Available | Positive | 2831137 - 2832015 | 31484.2 |
| tetr family transcriptional regulator | EXZ48_13425 | Not Available | Positive | 2832026 - 2832664 | 23605.3 |
| pyridoxal phosphate-dependent aminotransferase | EXZ48_13430 | Not Available | Positive | 2832696 - 2833886 | 42710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
