Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 2816375 - 2816450 | Not Available |
| alpha-ketoglutarate-dependent dioxygenase alkb | EXZ48_13340 | Not Available | Positive | 2816753 - 2817346 | 22189.5 |
| hypothetical protein | EXZ48_13345 | Not Available | Positive | 2818077 - 2818469 | 14459.3 |
| protein tyrosine phosphatase | EXZ48_13350 | Not Available | Negative | 2818466 - 2819029 | 20826.1 |
| pyridoxal phosphate-dependent aminotransferase | EXZ48_13355 | Not Available | Positive | 2819241 - 2820407 | 42201.5 |
| atpase | EXZ48_13360 | Not Available | Negative | 2820414 - 2820941 | 18925.8 |
| udp-glucose 4-epimerase gale | EXZ48_13365 | Not Available | Positive | 2821055 - 2822047 | 35328.9 |
| chorismate mutase family protein | EXZ48_13370 | Not Available | Negative | 2822051 - 2822350 | 11122.3 |
| cytochrome d ubiquinol oxidase subunit ii | EXZ48_13375 | Not Available | Negative | 2822717 - 2823721 | 36795.7 |
| cytochrome ubiquinol oxidase subunit i | EXZ48_13380 | Not Available | Negative | 2823711 - 2825129 | 51695.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
