Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | EXZ48_13130 | Not Available | Negative | 2771248 - 2771904 | 23218.9 |
| transcription termination/antitermination protein nusa | EXZ48_13135 | Not Available | Negative | 2771980 - 2773578 | 59441.3 |
| ribosome maturation factor rimp | EXZ48_13140 | Not Available | Negative | 2773712 - 2774323 | 22292.4 |
| mfs transporter | EXZ48_13145 | Not Available | Positive | 2774581 - 2776209 | 58394.1 |
| lytic murein transglycosylase | EXZ48_13150 | Not Available | Negative | 2776267 - 2777523 | 44691.6 |
| recombination protein recr | EXZ48_13155 | Not Available | Negative | 2777533 - 2778138 | 21342.0 |
| mosc domain-containing protein | EXZ48_13160 | Not Available | Positive | 2778199 - 2778810 | 21988.3 |
| lyse family translocator | EXZ48_13165 | Not Available | Negative | 2778811 - 2779422 | 21472.2 |
| ybab/ebfc family nucleoid-associated protein | EXZ48_13170 | Not Available | Negative | 2779457 - 2779780 | 11441.1 |
| dna polymerase iii subunit gamma/tau | EXZ48_13175 | Not Available | Negative | 2779857 - 2781740 | 67530.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
