Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | EXZ48_13080 | Not Available | Negative | 2759536 - 2760135 | 20457.4 |
| lrp/asnc family transcriptional regulator | EXZ48_13085 | Not Available | Positive | 2760265 - 2760723 | 17276.1 |
| class i sam-dependent methyltransferase | EXZ48_13090 | Not Available | Negative | 2760727 - 2761743 | 37298.8 |
| polyribonucleotide nucleotidyltransferase | EXZ48_13095 | Not Available | Negative | 2761882 - 2764023 | 77153.8 |
| 30s ribosomal protein s15 | EXZ48_13100 | Not Available | Negative | 2764377 - 2764646 | 10083.2 |
| sh3 domain-containing protein | EXZ48_13105 | Not Available | Negative | 2764798 - 2765127 | 11503.6 |
| histidine kinase | EXZ48_13110 | Not Available | Negative | 2765171 - 2766826 | 60024.3 |
| trna pseudouridine(55) synthase trub | EXZ48_13115 | Not Available | Negative | 2767052 - 2767987 | 33819.5 |
| 30s ribosome-binding factor rbfa | EXZ48_13120 | Not Available | Negative | 2768000 - 2768410 | 15428.4 |
| translation initiation factor if-2 | EXZ48_13125 | Not Available | Negative | 2768483 - 2771143 | 96501.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
