Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2934 domain-containing protein | EXZ48_13030 | Not Available | Negative | 2752123 - 2752389 | 10249.6 |
| hypothetical protein | EXZ48_13035 | Not Available | Positive | 2752559 - 2753734 | 41438.0 |
| ydcf family protein | EXZ48_13040 | Not Available | Positive | 2753772 - 2754563 | 28451.5 |
| hypothetical protein | EXZ48_13045 | Not Available | Negative | 2754567 - 2755040 | 16827.2 |
| trimeric intracellular cation channel family protein | EXZ48_13050 | Not Available | Positive | 2755178 - 2755813 | 21872.2 |
| transcriptional repressor | EXZ48_13055 | Not Available | Negative | 2755829 - 2756248 | 15567.7 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | EXZ48_13060 | Not Available | Positive | 2756565 - 2757080 | 19086.1 |
| beta-ketoacyl-acp synthase i | EXZ48_13065 | Not Available | Positive | 2757161 - 2758384 | 43183.8 |
| enoyl-[acyl-carrier-protein] reductase fabi | EXZ48_13070 | Not Available | Positive | 2758390 - 2759196 | 28640.3 |
| hypothetical protein | EXZ48_13075 | Not Available | Negative | 2759242 - 2759469 | 7978.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
