Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_12980 | Not Available | Positive | 2741502 - 2742749 | 44988.6 |
| hypothetical protein | EXZ48_12985 | Not Available | Negative | 2742753 - 2743088 | 12407.1 |
| nicotinate phosphoribosyltransferase | EXZ48_12990 | Not Available | Negative | 2743146 - 2744528 | 50406.0 |
| hypothetical protein | EXZ48_12995 | Not Available | Positive | 2744936 - 2746486 | 54503.6 |
| 30s ribosomal protein s1 | EXZ48_13000 | Not Available | Negative | 2746557 - 2748263 | 62450.2 |
| (d)cmp kinase | EXZ48_13005 | Not Available | Negative | 2748406 - 2749038 | 22327.5 |
| hypothetical protein | EXZ48_13010 | Not Available | Negative | 2749035 - 2749844 | 29496.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EXZ48_13015 | Not Available | Negative | 2749866 - 2751212 | 46834.6 |
| tigr02300 family protein | EXZ48_13020 | Not Available | Positive | 2751483 - 2751872 | 14134.3 |
| Trna-ala | Not Available | Not Available | Positive | 2752019 - 2752094 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
