Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | EXZ48_12880 | Not Available | Negative | 2720678 - 2721583 | 34162.8 |
| chemotaxis protein chew | EXZ48_12885 | Not Available | Negative | 2721580 - 2722047 | 16761.6 |
| chemotaxis protein chea | EXZ48_12890 | Not Available | Negative | 2722054 - 2724333 | 80938.9 |
| response regulator | EXZ48_12895 | Not Available | Negative | 2724359 - 2724724 | 13469.2 |
| stas domain-containing protein | EXZ48_12900 | Not Available | Negative | 2724721 - 2725020 | 10663.0 |
| globin-coupled sensor protein | EXZ48_12905 | Not Available | Negative | 2725162 - 2726874 | 61270.9 |
| carbohydrate kinase | EXZ48_12910 | Not Available | Negative | 2727257 - 2728618 | 48044.7 |
| l-rhamnose mutarotase | EXZ48_12915 | Not Available | Negative | 2728623 - 2728937 | 12131.6 |
| abc transporter permease | EXZ48_12920 | Not Available | Negative | 2728941 - 2729939 | 35340.4 |
| abc transporter permease | EXZ48_12925 | Not Available | Negative | 2729932 - 2730918 | 34248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
