Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flig | EXZ48_12830 | Not Available | Positive | 2711189 - 2712229 | 37905.6 |
| flagellar biosynthesis protein flhb | EXZ48_12835 | Not Available | Positive | 2712287 - 2713420 | 42446.3 |
| hypothetical protein | EXZ48_12840 | Not Available | Positive | 2713426 - 2713869 | 16203.1 |
| luxr family transcriptional regulator | EXZ48_12845 | Not Available | Negative | 2714049 - 2714792 | 26404.1 |
| luxr family transcriptional regulator | EXZ48_12850 | Not Available | Negative | 2714928 - 2715671 | 27451.1 |
| flagellar m-ring protein flif | EXZ48_12855 | Not Available | Negative | 2716236 - 2717930 | 59423.4 |
| hypothetical protein | EXZ48_12860 | Not Available | Negative | 2718197 - 2718586 | 14000.0 |
| chemoreceptor glutamine deamidase ched | EXZ48_12865 | Not Available | Negative | 2718683 - 2719237 | 19904.0 |
| response regulator | EXZ48_12870 | Not Available | Negative | 2719234 - 2719623 | 13776.1 |
| chemotaxis response regulator protein-glutamate methylesterase | EXZ48_12875 | Not Available | Negative | 2719623 - 2720681 | 37547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
