Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EXZ48_12680 | Not Available | Negative | 2678577 - 2679251 | 25336.2 |
| lytic transglycosylase domain-containing protein | EXZ48_12685 | Not Available | Negative | 2679533 - 2680111 | 20958.1 |
| flagellar hook-length control protein flik | EXZ48_12690 | Not Available | Negative | 2680035 - 2681447 | 47329.1 |
| chemotaxis protein | EXZ48_12695 | Not Available | Negative | 2681444 - 2682781 | 48395.3 |
| motb family protein | EXZ48_12700 | Not Available | Negative | 2682786 - 2684009 | 43472.6 |
| hypothetical protein | EXZ48_12705 | Not Available | Negative | 2684006 - 2684659 | 23463.8 |
| flagellin | EXZ48_12710 | Not Available | Negative | 2684974 - 2685936 | 34210.0 |
| hypothetical protein | EXZ48_12715 | Not Available | Positive | 2686711 - 2690790 | 130545.0 |
| glycosyl transferase | EXZ48_12720 | Not Available | Positive | 2690971 - 2693019 | 74969.4 |
| hypothetical protein | EXZ48_12725 | Not Available | Positive | 2693067 - 2694359 | 48138.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
