Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | EXZ48_12580 | Not Available | Negative | 2658815 - 2660467 | 62219.2 |
| abc transporter permease subunit | EXZ48_12585 | Not Available | Negative | 2660548 - 2661693 | 40944.4 |
| sugar abc transporter permease | EXZ48_12590 | Not Available | Negative | 2661695 - 2662675 | 36591.6 |
| carbohydrate abc transporter substrate-binding protein | EXZ48_12595 | Not Available | Negative | 2662895 - 2664253 | 49135.1 |
| laci family dna-binding transcriptional regulator | EXZ48_12600 | Not Available | Positive | 2664565 - 2665593 | 37578.4 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EXZ48_12605 | Not Available | Negative | 2665784 - 2666683 | 30988.6 |
| wecb/taga/cpsf family glycosyltransferase | EXZ48_12610 | Not Available | Positive | 2667210 - 2668013 | 29352.6 |
| hypothetical protein | EXZ48_12615 | Not Available | Negative | 2668096 - 2668626 | 18762.9 |
| hypothetical protein | EXZ48_12620 | Not Available | Negative | 2668623 - 2668991 | 13819.2 |
| rod-binding protein | EXZ48_12625 | Not Available | Negative | 2669007 - 2669564 | 19162.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
