Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EXZ48_12530 | Not Available | Negative | 2644757 - 2645371 | 22046.7 |
| methyl-accepting chemotaxis protein | EXZ48_12535 | Not Available | Negative | 2645469 - 2647991 | 91016.2 |
| nad(p)/fad-dependent oxidoreductase | EXZ48_12540 | Not Available | Negative | 2648531 - 2649712 | 42133.7 |
| glutamine synthetase | EXZ48_12545 | Not Available | Positive | 2649882 - 2651321 | 52808.9 |
| fad-binding oxidoreductase | EXZ48_12550 | Not Available | Positive | 2651419 - 2652702 | 46660.9 |
| glucose-6-phosphate dehydrogenase | EXZ48_12555 | Not Available | Positive | 2652799 - 2654271 | 55053.9 |
| 6-phosphogluconolactonase | EXZ48_12560 | Not Available | Positive | 2654281 - 2654979 | 24339.8 |
| phosphogluconate dehydratase | EXZ48_12565 | Not Available | Positive | 2655104 - 2656924 | 64145.4 |
| hypothetical protein | EXZ48_12570 | Not Available | Negative | 2657121 - 2657534 | 15960.3 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_12575 | Not Available | Negative | 2657642 - 2658733 | 39407.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
