Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate--coa ligase | EXZ48_12480 | Not Available | Negative | 2632776 - 2634728 | 70914.0 |
| asma family protein | EXZ48_12485 | Not Available | Positive | 2634911 - 2636752 | 65600.9 |
| abc transporter permease subunit | EXZ48_12490 | Not Available | Negative | 2636770 - 2637588 | 29590.9 |
| abc transporter permease subunit | EXZ48_12495 | Not Available | Negative | 2637593 - 2638504 | 33627.0 |
| abc transporter atp-binding protein | EXZ48_12500 | Not Available | Negative | 2638509 - 2639651 | 41822.6 |
| polyamine abc transporter substrate-binding protein | EXZ48_12505 | Not Available | Negative | 2639733 - 2640827 | 40174.7 |
| helix-turn-helix domain-containing protein | EXZ48_12510 | Not Available | Negative | 2641012 - 2642427 | 52096.8 |
| isocitrate lyase | EXZ48_12515 | Not Available | Positive | 2642647 - 2643936 | 47037.6 |
| hypothetical protein | EXZ48_12520 | Not Available | Positive | 2644034 - 2644273 | 8664.46 |
| voc family protein | EXZ48_12525 | Not Available | Negative | 2644346 - 2644732 | 14111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
