Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EXZ48_12430 | Not Available | Negative | 2615604 - 2617100 | 53406.2 |
| lysr family transcriptional regulator | EXZ48_12435 | Not Available | Positive | 2617206 - 2618087 | 32569.9 |
| hypothetical protein | EXZ48_12440 | Not Available | Negative | 2618091 - 2619041 | 33840.7 |
| hypothetical protein | EXZ48_12445 | Not Available | Negative | 2619049 - 2621007 | 72291.7 |
| hypothetical protein | EXZ48_12450 | Not Available | Negative | 2621004 - 2623421 | 84173.1 |
| udp-forming cellulose synthase catalytic subunit | EXZ48_12455 | Not Available | Negative | 2623354 - 2625573 | 82989.2 |
| Trna-his | Not Available | Not Available | Positive | 2626068 - 2626144 | Not Available |
| phasin | EXZ48_12465 | Not Available | Negative | 2626294 - 2626743 | 15994.0 |
| pas domain s-box protein | EXZ48_12470 | Not Available | Positive | 2626987 - 2630679 | 131000.0 |
| iron abc transporter permease | EXZ48_12475 | Not Available | Positive | 2630952 - 2632529 | 56320.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
