Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_12380 | Not Available | Negative | 2605221 - 2606075 | 30934.7 |
| abc transporter permease subunit | EXZ48_12385 | Not Available | Negative | 2606075 - 2606983 | 32359.5 |
| abc transporter permease subunit | EXZ48_12390 | Not Available | Negative | 2606994 - 2607998 | 36734.4 |
| abc transporter substrate-binding protein | EXZ48_12395 | Not Available | Negative | 2608102 - 2609697 | 58681.7 |
| luxr family transcriptional regulator | EXZ48_12400 | Not Available | Positive | 2610189 - 2610908 | 27095.4 |
| response regulator | EXZ48_12405 | Not Available | Positive | 2611034 - 2611441 | 15213.1 |
| iron-responsive transcriptional regulator rira | EXZ48_12410 | Not Available | Negative | 2611563 - 2612024 | 16853.7 |
| fe(3+) abc transporter substrate-binding protein | EXZ48_12415 | Not Available | Positive | 2612204 - 2613247 | 37664.7 |
| m48 family metallopeptidase | EXZ48_12420 | Not Available | Negative | 2613306 - 2614382 | 37890.4 |
| duf898 domain-containing protein | EXZ48_12425 | Not Available | Negative | 2614372 - 2615487 | 40539.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
