Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3102 domain-containing protein | EXZ48_12160 | Not Available | Negative | 2576468 - 2576896 | 16036.4 |
| hypothetical protein | EXZ48_12165 | Not Available | Positive | 2577029 - 2578474 | 53286.1 |
| methyl-accepting chemotaxis protein | EXZ48_12340 | Not Available | Positive | 2599620 - 2600012 | 13644.7 |
| chemotaxis protein chew | EXZ48_12345 | Not Available | Positive | 2600015 - 2600509 | 17776.6 |
| protein-glutamate o-methyltransferase cher | EXZ48_12350 | Not Available | Positive | 2600520 - 2601377 | 32056.2 |
| chemotaxis response regulator protein-glutamate methylesterase | EXZ48_12355 | Not Available | Positive | 2601377 - 2602465 | 38568.1 |
| para family protein | EXZ48_12360 | Not Available | Positive | 2602613 - 2603323 | 25777.4 |
| rida family protein | EXZ48_12365 | Not Available | Negative | 2603390 - 2603734 | 12283.7 |
| gluconokinase | EXZ48_12370 | Not Available | Negative | 2603865 - 2604380 | 17607.2 |
| dipeptide abc transporter atp-binding protein | EXZ48_12375 | Not Available | Negative | 2604394 - 2605224 | 30949.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
