Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2497 domain-containing protein | EXZ48_12110 | Not Available | Negative | 2568994 - 2569758 | 27141.1 |
| transporter | EXZ48_12115 | Not Available | Negative | 2569971 - 2571368 | 49294.4 |
| protein-l-isoaspartate o-methyltransferase | EXZ48_12120 | Not Available | Negative | 2571627 - 2572277 | 23111.6 |
| tonb-system energizer exbb | EXZ48_12125 | Not Available | Positive | 2572588 - 2573664 | 37272.5 |
| tonb system transport protein exbd | EXZ48_12130 | Not Available | Positive | 2573669 - 2574106 | 15413.6 |
| Trna-cys | Not Available | Not Available | Positive | 2574319 - 2574392 | Not Available |
| hypothetical protein | EXZ48_12140 | Not Available | Positive | 2574569 - 2574826 | 9791.52 |
| hypothetical protein | EXZ48_12145 | Not Available | Positive | 2574874 - 2575455 | 22542.2 |
| hypothetical protein | EXZ48_12150 | Not Available | Positive | 2575460 - 2575780 | 11512.9 |
| hypothetical protein | EXZ48_12155 | Not Available | Negative | 2575925 - 2576158 | 8489.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
