Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| segregation/condensation protein a | EXZ48_12060 | Not Available | Negative | 2553234 - 2554043 | 30287.3 |
| beta-n-acetylhexosaminidase | EXZ48_12065 | Not Available | Negative | 2554157 - 2555176 | 36397.0 |
| spor domain-containing protein | EXZ48_12070 | Not Available | Negative | 2555302 - 2558604 | 117652.0 |
| arginine--trna ligase | EXZ48_12075 | Not Available | Negative | 2558668 - 2560428 | 64632.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | EXZ48_12080 | Not Available | Negative | 2560495 - 2561715 | 46372.9 |
| iron-sulfur cluster insertion protein erpa | EXZ48_12085 | Not Available | Positive | 2561934 - 2562266 | 11858.9 |
| exodeoxyribonuclease iii | EXZ48_12090 | Not Available | Positive | 2562302 - 2563093 | 29652.1 |
| sel1 repeat family protein | EXZ48_12095 | Not Available | Negative | 2563148 - 2563951 | 28988.3 |
| transporter | EXZ48_12100 | Not Available | Negative | 2564315 - 2565568 | 45070.9 |
| valine--trna ligase | EXZ48_12105 | Not Available | Negative | 2565927 - 2568854 | 109614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
