Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | EXZ48_12010 | Not Available | Negative | 2544167 - 2545747 | 54540.1 |
| biotin biosynthesis protein bioc | EXZ48_12015 | Not Available | Negative | 2545899 - 2546528 | 22428.8 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EXZ48_12020 | Not Available | Negative | 2546789 - 2547445 | 23846.2 |
| 5'/3'-nucleotidase sure | EXZ48_12025 | Not Available | Negative | 2547442 - 2548212 | 28313.8 |
| serine--trna ligase | EXZ48_12030 | Not Available | Negative | 2548232 - 2549515 | 47301.5 |
| twin-arginine translocase subunit tatc | EXZ48_12035 | Not Available | Negative | 2549584 - 2550420 | 31022.4 |
| twin-arginine translocase subunit tatb | EXZ48_12040 | Not Available | Negative | 2550417 - 2551028 | 21257.9 |
| twin-arginine translocase tata/tate family subunit | EXZ48_12045 | Not Available | Negative | 2551120 - 2551317 | 7140.83 |
| abc transporter atp-binding protein | EXZ48_12050 | Not Available | Negative | 2551360 - 2552463 | 39759.9 |
| smc-scp complex subunit scpb | EXZ48_12055 | Not Available | Negative | 2552528 - 2553259 | 26755.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
