Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | EXZ48_11910 | Not Available | Positive | 2527053 - 2527898 | 30706.6 |
| hypothetical protein | EXZ48_11915 | Not Available | Positive | 2527951 - 2528649 | 25214.0 |
| trigger factor | EXZ48_11920 | Not Available | Negative | 2528720 - 2530195 | 54300.1 |
| Trna-leu | Not Available | Not Available | Positive | 2530477 - 2530561 | Not Available |
| hypothetical protein | EXZ48_11930 | Not Available | Negative | 2530688 - 2531278 | 21309.6 |
| duf2157 domain-containing protein | EXZ48_11935 | Not Available | Negative | 2531282 - 2532385 | 38942.1 |
| duf1127 domain-containing protein | EXZ48_11940 | Not Available | Positive | 2533488 - 2533631 | 5554.64 |
| duf1127 domain-containing protein | EXZ48_11945 | Not Available | Positive | 2533977 - 2534120 | 5551.68 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | EXZ48_11950 | Not Available | Positive | 2534264 - 2535673 | 49905.6 |
| hypothetical protein | EXZ48_11955 | Not Available | Positive | 2535651 - 2535860 | 7340.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
