Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 2515619 - 2515693 | Not Available |
| single-stranded-dna-specific exonuclease recj | EXZ48_11865 | Not Available | Negative | 2515726 - 2517534 | 64306.4 |
| homoserine dehydrogenase | EXZ48_11870 | Not Available | Negative | 2517841 - 2519163 | 46182.7 |
| ll-diaminopimelate aminotransferase | EXZ48_11875 | Not Available | Negative | 2519222 - 2520442 | 44683.8 |
| shoct domain-containing protein | EXZ48_11880 | Not Available | Negative | 2520617 - 2520922 | 10552.2 |
| class i poly(r)-hydroxyalkanoic acid synthase | EXZ48_11885 | Not Available | Positive | 2521087 - 2522943 | 69118.9 |
| dna/rna nuclease sfsa | EXZ48_11890 | Not Available | Positive | 2522957 - 2523676 | 26297.6 |
| type i methionyl aminopeptidase | EXZ48_11895 | Not Available | Positive | 2523707 - 2524534 | 29867.8 |
| jab domain-containing protein | EXZ48_11900 | Not Available | Positive | 2524542 - 2525372 | 30546.6 |
| si-specific nad(p)(+) transhydrogenase | EXZ48_11905 | Not Available | Positive | 2525556 - 2526962 | 51312.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
