Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | EXZ48_11660 | Not Available | Positive | 2482101 - 2484158 | 75110.3 |
| hypothetical protein | EXZ48_11665 | Not Available | Positive | 2484229 - 2484654 | 15178.0 |
| duf2336 domain-containing protein | EXZ48_11670 | Not Available | Negative | 2484780 - 2485907 | 40156.3 |
| hypothetical protein | EXZ48_11675 | Not Available | Positive | 2486036 - 2486674 | 21855.2 |
| flavin reductase family protein | EXZ48_11680 | Not Available | Negative | 2486685 - 2487293 | 21877.1 |
| nitroreductase | EXZ48_11685 | Not Available | Negative | 2487298 - 2487882 | 21668.1 |
| hypothetical protein | EXZ48_11690 | Not Available | Positive | 2487983 - 2488975 | 34667.4 |
| glycerol acyltransferase | EXZ48_11695 | Not Available | Negative | 2488972 - 2489808 | 31001.1 |
| threonine--trna ligase | EXZ48_11700 | Not Available | Negative | 2489884 - 2491857 | 74472.9 |
| atp-dependent dna helicase recg | EXZ48_11705 | Not Available | Negative | 2492005 - 2493384 | 51384.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
