Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | EXZ48_11560 | Not Available | Negative | 2458058 - 2459452 | 50427.7 |
| alanine--trna ligase | EXZ48_11565 | Not Available | Negative | 2459397 - 2462057 | 95297.4 |
| recombinase reca | EXZ48_11570 | Not Available | Negative | 2462372 - 2463460 | 38794.7 |
| carbohydrate kinase | EXZ48_11575 | Not Available | Positive | 2463695 - 2464642 | 31840.1 |
| pseudouridine-5'-phosphate glycosidase | EXZ48_11580 | Not Available | Positive | 2464677 - 2465603 | 32621.3 |
| phosphopyruvate hydratase | EXZ48_11585 | Not Available | Negative | 2465867 - 2467141 | 44884.2 |
| 3-deoxy-8-phosphooctulonate synthase | EXZ48_11590 | Not Available | Negative | 2467272 - 2468111 | 30038.3 |
| voc family protein | EXZ48_11595 | Not Available | Negative | 2468113 - 2469006 | 32298.2 |
| fad-binding oxidoreductase | EXZ48_11600 | Not Available | Positive | 2469154 - 2470395 | 44273.2 |
| metallophosphoesterase | EXZ48_11605 | Not Available | Positive | 2470495 - 2471235 | 26137.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
