Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | EXZ48_11510 | Not Available | Negative | 2446955 - 2447572 | 23461.4 |
| terc family protein | EXZ48_11515 | Not Available | Positive | 2447907 - 2448899 | 36336.4 |
| atp-binding protein | EXZ48_11520 | Not Available | Negative | 2448903 - 2450414 | 54547.5 |
| glutamate racemase | EXZ48_11525 | Not Available | Negative | 2450535 - 2451296 | 27782.4 |
| rna methyltransferase | EXZ48_11530 | Not Available | Negative | 2451370 - 2452203 | 30681.6 |
| hypothetical protein | EXZ48_11535 | Not Available | Negative | 2452378 - 2452953 | 20512.6 |
| nadp-dependent isocitrate dehydrogenase | EXZ48_11540 | Not Available | Positive | 2453168 - 2454382 | 45334.3 |
| glutathione s-transferase family protein | EXZ48_11545 | Not Available | Positive | 2454494 - 2455132 | 23687.3 |
| arac family transcriptional regulator | EXZ48_11550 | Not Available | Negative | 2455286 - 2456155 | 33001.3 |
| sulp family inorganic anion transporter | EXZ48_11555 | Not Available | Positive | 2456337 - 2458016 | 58372.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
