Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | EXZ48_11460 | Not Available | Positive | 2437576 - 2438994 | 51167.2 |
| phosphoribosylformylglycinamidine synthase subunit purl | EXZ48_11465 | Not Available | Positive | 2439100 - 2441337 | 78883.9 |
| bola family transcriptional regulator | EXZ48_11470 | Not Available | Positive | 2441356 - 2441589 | 8218.97 |
| hypothetical protein | EXZ48_11475 | Not Available | Positive | 2441596 - 2441859 | 9550.86 |
| hypothetical protein | EXZ48_11480 | Not Available | Positive | 2441869 - 2442312 | 15975.8 |
| grx4 family monothiol glutaredoxin | EXZ48_11485 | Not Available | Positive | 2442431 - 2442766 | 12209.6 |
| bcr/cfla family efflux mfs transporter | EXZ48_11490 | Not Available | Positive | 2442896 - 2444101 | 43457.9 |
| inositol monophosphatase | EXZ48_11495 | Not Available | Negative | 2444231 - 2445052 | 29510.3 |
| trna 2-thiocytidine(32) synthetase ttca | EXZ48_11500 | Not Available | Negative | 2445039 - 2445920 | 32793.6 |
| glutaminase | EXZ48_11505 | Not Available | Negative | 2445952 - 2446881 | 32779.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
