Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | EXZ48_11360 | Not Available | Negative | 2421088 - 2422326 | 46458.1 |
| moxr family atpase | EXZ48_11365 | Not Available | Negative | 2422330 - 2423256 | 34182.2 |
| flavin reductase | EXZ48_11370 | Not Available | Negative | 2423284 - 2423766 | 17013.5 |
| abc transporter substrate-binding protein | EXZ48_11375 | Not Available | Positive | 2423954 - 2425030 | 37136.8 |
| s58 family peptidase | EXZ48_11380 | Not Available | Positive | 2425030 - 2426031 | 33910.3 |
| ribulose-phosphate 3-epimerase | EXZ48_11385 | Not Available | Positive | 2426101 - 2426778 | 23923.0 |
| duf2259 domain-containing protein | EXZ48_11390 | Not Available | Positive | 2426775 - 2427509 | 26138.9 |
| hypothetical protein | EXZ48_11395 | Not Available | Positive | 2427557 - 2428042 | 17658.0 |
| adenylosuccinate lyase | EXZ48_11400 | Not Available | Positive | 2428107 - 2429414 | 48589.5 |
| hypothetical protein | EXZ48_11405 | Not Available | Positive | 2429514 - 2429750 | 8312.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
