Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | EXZ48_11310 | Not Available | Positive | 2411072 - 2411539 | 16762.2 |
| ferritin-like domain-containing protein | EXZ48_11315 | Not Available | Positive | 2411562 - 2412389 | 30691.9 |
| m23 family peptidase | EXZ48_11320 | Not Available | Positive | 2412485 - 2413771 | 45993.6 |
| dead/deah box helicase | EXZ48_11325 | Not Available | Positive | 2413964 - 2415451 | 55154.0 |
| nudix domain-containing protein | EXZ48_11330 | Not Available | Positive | 2415461 - 2415871 | 15160.3 |
| tonb-dependent receptor | EXZ48_11335 | Not Available | Negative | 2415902 - 2418016 | 75384.6 |
| tfox family protein | EXZ48_11340 | Not Available | Negative | 2418125 - 2418442 | 11931.3 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | EXZ48_11345 | Not Available | Negative | 2418446 - 2420056 | 54743.5 |
| xdhc family protein | EXZ48_11350 | Not Available | Negative | 2420053 - 2420751 | 24770.9 |
| xdhc family protein | EXZ48_11355 | Not Available | Negative | 2420751 - 2421077 | 11454.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
