Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | EXZ48_11260 | Not Available | Negative | 2396228 - 2397466 | 45226.2 |
| fe-s cluster assembly protein sufd | EXZ48_11265 | Not Available | Negative | 2397591 - 2398865 | 44968.3 |
| fe-s cluster assembly atpase sufc | EXZ48_11270 | Not Available | Negative | 2398889 - 2399644 | 27363.1 |
| fe-s cluster assembly protein sufb | EXZ48_11275 | Not Available | Negative | 2399970 - 2401439 | 54730.8 |
| cysteine desulfurase | EXZ48_11280 | Not Available | Negative | 2401579 - 2402736 | 39599.7 |
| alpha/beta fold hydrolase | EXZ48_11285 | Not Available | Positive | 2402950 - 2403627 | 25075.0 |
| ggdef domain-containing protein | EXZ48_11290 | Not Available | Negative | 2403701 - 2404879 | 41757.4 |
| anhydro-n-acetylmuramic acid kinase | EXZ48_11295 | Not Available | Negative | 2404972 - 2406105 | 39428.9 |
| tyrosine--trna ligase | EXZ48_11300 | Not Available | Positive | 2406234 - 2407487 | 45903.1 |
| hypothetical protein | EXZ48_11305 | Not Available | Negative | 2407536 - 2410922 | 119255.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
