Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | EXZ48_11210 | Not Available | Negative | 2386237 - 2387229 | 37181.5 |
| lrp/asnc family transcriptional regulator | EXZ48_11215 | Not Available | Negative | 2387287 - 2387523 | 8707.42 |
| hypothetical protein | EXZ48_11220 | Not Available | Positive | 2387735 - 2388022 | 10137.1 |
| glycine cleavage system aminomethyltransferase gcvt | EXZ48_11225 | Not Available | Positive | 2388436 - 2389575 | 40301.1 |
| glycine cleavage system protein gcvh | EXZ48_11230 | Not Available | Positive | 2389610 - 2389972 | 12721.8 |
| glycine dehydrogenase (aminomethyl-transferring) | EXZ48_11235 | Not Available | Positive | 2389972 - 2392842 | 104628.0 |
| response regulator | EXZ48_11240 | Not Available | Negative | 2392929 - 2393336 | 14696.4 |
| pas domain s-box protein | EXZ48_11245 | Not Available | Negative | 2393320 - 2395185 | 68714.9 |
| fe-s cluster assembly scaffold sufa | EXZ48_11250 | Not Available | Negative | 2395313 - 2395705 | 13498.1 |
| suf system fe-s cluster assembly protein | EXZ48_11255 | Not Available | Negative | 2395836 - 2396216 | 13812.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
