Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | EXZ48_11160 | Not Available | Positive | 2379549 - 2380676 | 39900.3 |
| gnat family n-acetyltransferase | EXZ48_11165 | Not Available | Positive | 2380682 - 2381137 | 16805.2 |
| yaii/yqxd family protein | EXZ48_11170 | Not Available | Positive | 2381178 - 2381639 | 16454.7 |
| duf1345 domain-containing protein | EXZ48_11175 | Not Available | Positive | 2381636 - 2382280 | 22903.8 |
| s-formylglutathione hydrolase | EXZ48_11180 | Not Available | Positive | 2382299 - 2383132 | 31261.0 |
| multidrug efflux smr transporter | EXZ48_11185 | Not Available | Positive | 2383286 - 2383600 | 10856.0 |
| doxx family protein | EXZ48_11190 | Not Available | Negative | 2383597 - 2383980 | 13748.0 |
| hypothetical protein | EXZ48_11195 | Not Available | Negative | 2384072 - 2384722 | 22687.5 |
| atpase | EXZ48_11200 | Not Available | Negative | 2384794 - 2385579 | 29128.7 |
| had family hydrolase | EXZ48_11205 | Not Available | Negative | 2385572 - 2386237 | 23829.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
