Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taxi family trap transporter solute-binding subunit | EXZ48_10905 | Not Available | Positive | 2329747 - 2330778 | 37271.0 |
| type i glutamate--ammonia ligase | EXZ48_10910 | Not Available | Negative | 2330866 - 2332275 | 52101.1 |
| p-ii family nitrogen regulator | EXZ48_10915 | Not Available | Negative | 2332336 - 2332674 | 12267.8 |
| nad(p)h-hydrate dehydratase | EXZ48_10920 | Not Available | Positive | 2333039 - 2334520 | 50840.2 |
| 3-keto-5-aminohexanoate cleavage protein | EXZ48_10925 | Not Available | Positive | 2334575 - 2335303 | 25989.0 |
| duf72 domain-containing protein | EXZ48_10930 | Not Available | Negative | 2335344 - 2336147 | 29922.3 |
| glutathione s-transferase family protein | EXZ48_10935 | Not Available | Negative | 2336183 - 2336806 | 22900.6 |
| excinuclease abc subunit uvra | EXZ48_10940 | Not Available | Negative | 2336811 - 2339729 | 106781.0 |
| single-stranded dna-binding protein | EXZ48_10945 | Not Available | Positive | 2340022 - 2340534 | 18303.1 |
| cupin domain-containing protein | EXZ48_10950 | Not Available | Positive | 2340615 - 2341022 | 14836.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
