Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | EXZ48_10855 | Not Available | Negative | 2316931 - 2319036 | 76787.1 |
| succinate dehydrogenase assembly factor 2 family protein | EXZ48_10860 | Not Available | Positive | 2319144 - 2319452 | 11857.1 |
| transcription-repair coupling factor | EXZ48_10865 | Not Available | Positive | 2319449 - 2322955 | 127871.0 |
| glutathione s-transferase family protein | EXZ48_10870 | Not Available | Positive | 2322984 - 2323616 | 23283.6 |
| class i sam-dependent methyltransferase | EXZ48_10875 | Not Available | Positive | 2323722 - 2324480 | 27842.9 |
| dsba family oxidoreductase | EXZ48_10880 | Not Available | Negative | 2324500 - 2325171 | 24220.2 |
| abc transporter substrate-binding protein | EXZ48_10885 | Not Available | Negative | 2325368 - 2327284 | 71894.2 |
| invasion associated locus b family protein | EXZ48_10890 | Not Available | Positive | 2327457 - 2328086 | 22574.6 |
| heat shock protein hspq | EXZ48_10895 | Not Available | Negative | 2328178 - 2328510 | 13005.3 |
| hypothetical protein | EXZ48_10900 | Not Available | Positive | 2328665 - 2329708 | 37196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
