Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EXZ48_10705 | Not Available | Positive | 2287345 - 2288154 | 27997.7 |
| duf1009 domain-containing protein | EXZ48_10710 | Not Available | Positive | 2288160 - 2289038 | 30359.9 |
| lipid-a-disaccharide synthase | EXZ48_10715 | Not Available | Positive | 2289035 - 2290213 | 42931.5 |
| citrate (si)-synthase | EXZ48_10720 | Not Available | Negative | 2290245 - 2291534 | 47838.5 |
| comec/rec2 family competence protein | EXZ48_10725 | Not Available | Positive | 2291843 - 2294299 | 86874.1 |
| transcriptional repressor lexa | EXZ48_10730 | Not Available | Negative | 2294293 - 2295018 | 26268.9 |
| hypothetical protein | EXZ48_10735 | Not Available | Negative | 2295346 - 2295921 | 21353.4 |
| helix-turn-helix domain-containing protein | EXZ48_10740 | Not Available | Positive | 2296234 - 2297295 | 40409.8 |
| hypothetical protein | EXZ48_10745 | Not Available | Positive | 2297353 - 2298267 | 34234.8 |
| atp-binding protein | EXZ48_10750 | Not Available | Positive | 2298197 - 2299030 | 31243.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
