Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | EXZ48_10655 | Not Available | Positive | 2276953 - 2277714 | 27679.2 |
| elongation factor ts | EXZ48_10660 | Not Available | Positive | 2277958 - 2278884 | 32168.7 |
| ump kinase | EXZ48_10665 | Not Available | Positive | 2279072 - 2279794 | 24853.1 |
| ribosome recycling factor | EXZ48_10670 | Not Available | Positive | 2279852 - 2280412 | 20743.9 |
| isoprenyl transferase | EXZ48_10675 | Not Available | Positive | 2280455 - 2281201 | 27476.9 |
| phosphatidate cytidylyltransferase | EXZ48_10680 | Not Available | Positive | 2281201 - 2282034 | 28988.1 |
| rip metalloprotease rsep | EXZ48_10685 | Not Available | Positive | 2282062 - 2283195 | 40437.8 |
| outer membrane protein assembly factor bama | EXZ48_10690 | Not Available | Positive | 2283435 - 2285765 | 84651.5 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EXZ48_10695 | Not Available | Positive | 2285815 - 2286882 | 37118.9 |
| 3-hydroxyacyl-acp dehydratase fabz | EXZ48_10700 | Not Available | Positive | 2286875 - 2287342 | 17157.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
