Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone oxidoreductase | EXZ48_10490 | Not Available | Positive | 2246913 - 2247884 | 33908.8 |
| abc transporter atp-binding protein | EXZ48_10495 | Not Available | Positive | 2247933 - 2249504 | 55134.8 |
| abc transporter permease | EXZ48_10500 | Not Available | Positive | 2249494 - 2250588 | 39338.1 |
| abc transporter permease | EXZ48_10505 | Not Available | Positive | 2250588 - 2251508 | 32105.4 |
| bmp family abc transporter substrate-binding protein | EXZ48_10510 | Not Available | Positive | 2251560 - 2252630 | 38390.7 |
| fadr family transcriptional regulator | EXZ48_10515 | Not Available | Positive | 2252797 - 2253540 | 26912.6 |
| hypothetical protein | EXZ48_10525 | Not Available | Negative | 2255434 - 2255781 | 12758.7 |
| hypothetical protein | EXZ48_10530 | Not Available | Negative | 2255807 - 2256070 | 9792.81 |
| duf992 domain-containing protein | EXZ48_10535 | Not Available | Negative | 2256155 - 2256682 | 17577.0 |
| Trna-ser | Not Available | Not Available | Positive | 2257220 - 2257309 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
