Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | EXZ48_10440 | Not Available | Positive | 2233959 - 2237291 | 121415.0 |
| hypothetical protein | EXZ48_10445 | Not Available | Positive | 2237341 - 2238252 | 32528.5 |
| caspase family protein | EXZ48_10450 | Not Available | Positive | 2238252 - 2239916 | 59043.9 |
| duf4384 domain-containing protein | EXZ48_10455 | Not Available | Positive | 2239916 - 2241469 | 55708.1 |
| hypothetical protein | EXZ48_10460 | Not Available | Negative | 2241516 - 2242403 | 32848.7 |
| Trna-lys | Not Available | Not Available | Positive | 2242587 - 2242662 | Not Available |
| cytochrome c biogenesis protein ccda | EXZ48_10470 | Not Available | Positive | 2242892 - 2243641 | 26107.0 |
| aec family transporter | EXZ48_10475 | Not Available | Positive | 2243786 - 2244748 | 34084.2 |
| ubih/ubif family hydroxylase | EXZ48_10480 | Not Available | Negative | 2244716 - 2245924 | 42911.9 |
| phosphatidylcholine/phosphatidylserine synthase | EXZ48_10485 | Not Available | Positive | 2246169 - 2246891 | 26890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
